The film starts with a brief pre-title clip from presenter Greg Palast’s aborted interview with Florida Director of Elections Clayton Roberts, who walks out.
Richard Phillips (Tom Hanks) takes command of the MV Maersk Alabama, an unarmed container ship from the Port of Salalah in Oman, with orders to sail through the Gulf of Aden to Mombasa, Kenya. Wary of pirate activity off the coast of the Horn of Africa, he and First Officer Shane Murphy (Michael Chernus) order strict security precautions on the vessel and carry out practice drills. During a drill, the vessel is chased by Somali pirates in two skiffs, and Phillips calls for help. Knowing that the pirates are listening to radio traffic, he pretends to call a warship, requesting immediate air support. One skiff turns around in response, and the other – manned by four heavily armed pirates led by Abduwali Muse (Barkhad Abdi) – loses engine power trying to steer through the Maersk Alabama 's wake.
While serving in the United States Army Special Forces in 2007, John Tyree (Channing Tatum), a Staff Sergeant, is lying on the ground after being shot multiple times in the neck and body, with his comrades gathered around him. In a voiceover, he recalls a childhood trip to the U.S. Mint and compares himself to a coin in the United States Military before stating that the last thing he thought of before he blacked out was "you".
Today
The film begins with commentary by passenger Detective Graham Waters (Don Cheadle) having suffered a car accident with his partner Ria (Jennifer Esposito). He mentions that the denizens of Los Angeles have lost their "sense of touch." Ria and the driver of the other car, Kim Lee, exchange racially charged insults. When Waters exits the car, he arrives at a police investigation crime scene concerning the discovery of "a dead kid."
The film opens on the morning of September 11, 2001. United States Secretary of Defense Donald Rumsfeld is hosting a breakfast for a number of members of the United States Congress. The purpose of the breakfast was to procure an increase to the defense budget, with Rumsfeld claiming they will soon need the money as something big is likely to occur soon given the rise of Islamic Extremism against the United States.
The film opens up on Operation Eagle Claw, the American operation to rescue American hostages being held at the U.S. embassy to Tehran. The operation is being aborted after a fatal helicopter crash, with the U.S. Delta Force evacuating to their C-130 transports. Among them is Captain Scott McCoy, who, against orders, rescues his wounded comrade Pete Peterson from the burning helicopter before the team finally evacuates. McCoy expresses his disgust for the politicians and military hierarchy that forced the mission to launch despite the risks, and announces he is resigning his commission.
The miniseries presented a dramatization of the sequence of events leading to the September 11, 2001 attacks by Al Qaeda on the United States, starting from the 1993 World Trade Center bombing and up to the minutes after the collapse of the World Trade Center in 2001. The point of view of the movie is from two primary protagonists: John P. O'Neill, and a composite Central Intelligence Agency (CIA) agent, "Kirk". O'Neill was the real-life Special Agent in charge of Al Qaeda investigations at the Federal Bureau of Investigation. He died in the collapse of the Twin Towers on September 11 shortly after retiring from the Federal Bureau of Investigation (FBI) and taking the position of Director of Security for the World Trade Center. The composite CIA agent "Kirk" is shown dealing with various American allies, especially Northern Alliance leader Ahmed Shah Massoud, in Afghanistan. In addition, "Patricia", a CIA headquarters analyst, represents the views of the rank and file at CIA headquarters. The miniseries features dramatizations of various incidents summarized in the 9/11 Commission Report, and represented in high level discussions held within both the Clinton and Bush administrations. The final hour of the movie dramatizes the events of 9/11, including a re-creation of the second plane entering the World Trade Center, Tom Burnett's calls to his wife, and John Miller's reporting near the scene of the attacks. The film concludes with information about the recommendations of the 9/11 Commission, as well as the performance evaluation the Commission gave the government when it reconvened in 2005.
On September 11, 2001, as information seeps out about the 9/11 attacks on America, the FAA begins directing all remaining aircraft in the air to nearby airports, completely clearing the skies. A total of 39 transatlantic flights at or near their "point of no return" (AKA point of safe return) are diverted to the nearest airport in Canada, Gander, Newfoundland. The anxious passengers leaving on business and vacation trips have no idea why their flights are being sent to a remote town in Canada. With wild rumours spreading, one British airliner's crew tells the passengers what is known, that a terrorist attack has taken place in the United States.
Nine-year-old Oskar Schell (Thomas Horn) is the son of German American Thomas Schell (Tom Hanks). Thomas would often send Oskar on missions to do something involving one of his riddles. The last riddle he ever gives Oskar is proof that New York City once possessed a Sixth Borough. In a flashback, Thomas and Oskar play a scavenger hunt to find objects throughout New York City. The game requires communication with other people and is not easy for the socially awkward Oskar who is told "If things were easy to find, they wouldn't be worth finding".
The movie begins by suggesting that friends and political allies of George W. Bush at Fox News Channel tilted the election of 2000 by prematurely declaring Bush the winner. It then suggests the handling of the voting controversy in Florida constituted election fraud.
First officer LeRoy Homer Jr. gets dressed in his F.A.A. official uniform, kisses his wife and leaves for work. The terrorist ringleader Ziad Jarrah shaves in his hotel room and then leaves for Newark International Airport.
Kyle Pratt (Jodie Foster), a U.S. aircraft engineer employed in Berlin, Germany, is widowed with a six-year-old daughter Julia (Marlene Lawston) after her husband David (John Benjamin Hickey) falls off the roof of their building to his death. Kyle decides to bury him in their hometown back in the U.S., on Long Island, NY. They fly aboard a passenger aircraft, the engines of which Kyle helped design. After falling asleep, Kyle wakes to find that Julia is missing. She begins to panic, and Captain Marcus Rich (Sean Bean) is forced to conduct a search. None of the passengers remember seeing her daughter, Julia has no register in either the Berlin airport or the passenger manifest, and Kyle cannot find Julia's boarding pass. Marcus and the other crew members suspect that Kyle has become unhinged by her husband's death, and has imagined bringing her daughter aboard. One flight attendant Stephanie (Kate Beahan) is particularly unsympathetic. Faced with the crew's growing skepticism regarding her daughter's existence, Kyle becomes more and more desperate. Because of her increasingly erratic, panicked behavior, air marshal Gene Carson (Peter Sarsgaard) is ordered to guard and handcuff her.